The detailed information of tRNA gene sequence


Sequence ID>SRA1001445
Genome IDSRR001064.358151
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 103
End posion on genome 16
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ttaagagatt
tRNA gene sequence 
GCGCGGGTGGCGAAATTGGTAGACGCACCAGGTTTAGGTCCTGACGGTAGACAATACTGT
GGGGGTTCGAGTCCCCCCCCGCGCACCA
Downstream region at tRNA end position 
ccccatgtaa
Secondary structure (Cloverleaf model)
>SRA1001445	Leu	TAG
                   t      ACCA ccccatgtaa
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTAGACAATACTGT
                    C   A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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