The detailed information of tRNA gene sequence


Sequence ID>SRA1001446
Genome IDSRR001064.362722
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 30
End posion on genome 106
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaataattt
tRNA gene sequence 
GCGGGGGTAGCTCAGCTGGTTAGAGCATCGGATTCATAACCCGAAGGTCGGCAGTTCAAG
TCTGCTCTCCCGTACTA
Downstream region at tRNA end position 
aagccccaaa
Secondary structure (Cloverleaf model)
>SRA1001446	Met	CAT
                   t      ACTA aagccccaaa
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T C G T C     A
      C G A        A      + | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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