The detailed information of tRNA gene sequence


Sequence ID>SRA1001448
Genome IDSRR001064.370115
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 4
End posion on genome 80
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnaat
tRNA gene sequence 
GCACCCGTAGCTCAGTTGGATAGAGCAACCGCCTTCTAAGCGGTAGGTCGCACGTTCGAA
TCGTGCCGGGTGCGCCA
Downstream region at tRNA end position 
ttaatacgcc
Secondary structure (Cloverleaf model)
>SRA1001448	Arg	TCT
                   t      GCCA ttaatacgcc
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T G C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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