The detailed information of tRNA gene sequence


Sequence ID>SRA1001458
Genome IDSRR001065.3841
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000153)
Species
Start position on genome 73
End posion on genome -1
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tctcgcttct
tRNA gene sequence 
CGGAGTGTAGCGCAGCCCGGTAGCGCACCTGGTTTGGGACCAGGGGGTCCAAGGTTCGAA
TCCTTGTACTCCGNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001458	Pro	TGG
                   t      NNnn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G + T          T A
                    T     G T T C C     A
      C G A        A      | | | | |     G
    C       C G C G       C A A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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