The detailed information of tRNA gene sequence


Sequence ID>SRA1001459
Genome IDSRR001065.4030
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000153)
Species
Start position on genome 77
End posion on genome 2
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acaaagtttc
tRNA gene sequence 
GGGGGTTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGTCAACCTCCACCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001459	Ala	TGC
                   c      ACCA annnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     T - A          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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