The detailed information of tRNA gene sequence


Sequence ID>SRA1001465
Genome IDSRR001065.36036
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000153)
Species
Start position on genome 1
End posion on genome 85
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCGGGATGGCGGAATAGGTAGACGCACGGGACTCAAAATCCCGCGCCGCAAGGCGTGCC
GGTTCGATTCCGGCTCCCGGCACCA
Downstream region at tRNA end position 
cagatattct
Secondary structure (Cloverleaf model)
>SRA1001465	Leu	CAA
                   n      ACCA cagatattct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    A       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGCGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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