The detailed information of tRNA gene sequence


Sequence ID>SRA1001473
Genome IDSRR001065.50433
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000153)
Species
Start position on genome 1
End posion on genome 74
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
nnnnnnnnnT
tRNA gene sequence 
TGGGGATTAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATGCCAAGGTTCAAATC
CTTGATCCCCAGTat
Downstream region at tRNA end position 
tacaccccat
Secondary structure (Cloverleaf model)
>SRA1001473	Gln	TTG
                   T      GTat tacaccccat
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     G T T C C     A
        G A        A      | | | | |     A
      C     A C C G       C A A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATGC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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