The detailed information of tRNA gene sequence


Sequence ID>SRA1001474
Genome IDSRR001065.50596
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000153)
Species
Start position on genome 39
End posion on genome 111
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
catttcccac
tRNA gene sequence 
GGGCTGATAGCTCAGCTGGGAGAGCGCCGCGTTCGCAATGCGGAGGTCGGGAGTTCGATC
CTCCTTCGGTCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001474	Ala	CGC
                   c      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     G - C
                     A - T          C T
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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