The detailed information of tRNA gene sequence


Sequence ID>SRA1001488
Genome IDSRR001067.77
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 90
End posion on genome 15
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgaagttttt
tRNA gene sequence 
GCTGGCTTAGCTCATCTGGTAGAGCACCTGACTTGTAATCAGGGGGTGGCGGGTTCAAGT
CCTGCAGCCAGCACCA
Downstream region at tRNA end position 
aataccgaag
Secondary structure (Cloverleaf model)
>SRA1001488	Thr	TGT
                   t      ACCA aataccgaag
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A          T G
                    T     C G T C C     A
      C T A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTG
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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