The detailed information of tRNA gene sequence


Sequence ID>SRA1001489
Genome IDSRR001067.4506
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 86
End posion on genome 1
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gatccatccg
tRNA gene sequence 
GCGAGGGTGGCGAAATTGGTAGACGCACCAGGTTTAGGTCCTGACGCCAGCAATGGTGTA
GGGGTTCGAGTCCCCTCCCTCGCACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001489	Leu	TAG
                   g      ACCn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T C C C C     A
      T A A        G      | | | | |     G
    T       A G C G       A G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCAGCAATGGTGT
                    C   A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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