The detailed information of tRNA gene sequence


Sequence ID>SRA1001492
Genome IDSRR001067.17223
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 4
End posion on genome 80
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnncaa
tRNA gene sequence 
GGGTCTGTAGCTCAGGTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTAGGTTCAAG
TCCTACCAGACCCACCA
Downstream region at tRNA end position 
agttacggac
Secondary structure (Cloverleaf model)
>SRA1001492	Ile	GAT
                   a      ACCA agttacggac
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C A T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK