The detailed information of tRNA gene sequence


Sequence ID>SRA1001498
Genome IDSRR001067.24331
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 12
End posion on genome 87
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cctcaattga
tRNA gene sequence 
TCCCTGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGT
CCAGGTCGGGGAGCCA
Downstream region at tRNA end position 
gaatacgaaa
Secondary structure (Cloverleaf model)
>SRA1001498	Asn	GTT
                   a      GCCA gaatacgaaa
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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