The detailed information of tRNA gene sequence


Sequence ID>SRA1001499
Genome IDSRR001067.24779
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 80
End posion on genome 5
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttactcccat
tRNA gene sequence 
GGAGGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATC
CCGTCAGCCTCCACCA
Downstream region at tRNA end position 
ttaannnnnn
Secondary structure (Cloverleaf model)
>SRA1001499	Val	TAC
                   t      ACCA ttaannnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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