The detailed information of tRNA gene sequence


Sequence ID>SRA1001506
Genome IDSRR001067.40151
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 112
End posion on genome 37
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAGTGTTCGAGT
CACTCACGCCCCACCA
Downstream region at tRNA end position 
gtatttgaaa
Secondary structure (Cloverleaf model)
>SRA1001506	Lys	CTT
                   c      ACCA gtatttgaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     C T C A C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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