The detailed information of tRNA gene sequence


Sequence ID>SRA1001514
Genome IDSRR001067.55593
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
attttattaa
tRNA gene sequence 
GCGCCCTTAGCTCAGCTGGATAGAGTATTTGACTACGAATCAAAAGGTCGGGAGTTCGAA
TCTCTCAGGGCGCGCCA
Downstream region at tRNA end position 
tttttnnnnn
Secondary structure (Cloverleaf model)
>SRA1001514	Arg	ACG
                   a      GCCA tttttnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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