The detailed information of tRNA gene sequence


Sequence ID>SRA1001524
Genome IDSRR001068.28172
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156)
Species
Start position on genome 13
End posion on genome 90
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agaggtttaT
tRNA gene sequence 
GTCTCAGTAGCTCAGCTGGATAGAGCACACGCCTTCTAAGCGTGCGGTCGGGGGTTCGAA
TCCCTCCTGGGACGTCA
Downstream region at tRNA end position 
agcatgtgga
Secondary structure (Cloverleaf model)
>SRA1001524	Arg	TCT
                   T      GTCA agcatgtgga
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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