The detailed information of tRNA gene sequence


Sequence ID>SRA1001529
Genome IDSRR001068.49956
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156)
Species
Start position on genome 36
End posion on genome 111
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggattttcgt
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACTGCCCTTTCACGGCTGTAACAGGGGTTCGAAT
CCCCTTGGGGACGCCA
Downstream region at tRNA end position 
ttccgataan
Secondary structure (Cloverleaf model)
>SRA1001529	Glu	TTC
                   t      GCCA ttccgataan
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    T   T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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