The detailed information of tRNA gene sequence


Sequence ID>SRA1001541
Genome IDSRR001069.24558
Search identical group
Phylum/ClassTilapia Farm, viral community isolated from the gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish showed no sign of disease) (SRP000157)
Species
Start position on genome 57
End posion on genome 135
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttttttatt
tRNA gene sequence 
TGGGAAATAGCTTAATTTGGTAGGAGCACTTAGTTTGGGTCTAAGGGGGTTGCAGGTTCA
AGTCCTGTTTTTCCAACCA
Downstream region at tRNA end position 
aatannnnnn
Secondary structure (Cloverleaf model)
>SRA1001541	Pro	TGG
                   t      ACCA aatannnnnn
                     T - A
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T
                     A - T          T G
                    T     T G T C C     A
    T T A A        A      + | | | |     A
  T         T T C G       G C A G G     C
  G         + | | |                 T T
  G         G A G C
    T A G          A     GGGGTT
                    C - G
                    T - A
                    T - A
                    A - T
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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