The detailed information of tRNA gene sequence


Sequence ID>SRA1001564
Genome IDSRR001071.48415
Search identical group
Phylum/ClassTilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000159)
Species
Start position on genome 91
End posion on genome 16
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnattaatgT
tRNA gene sequence 
GTCTCTGTGGCGCAATCGGCCAGCGCGCTCGGCTGTTAACCGAGAGGATGGTGGTTCGAG
CCCACCCAGGGACGTtc
Downstream region at tRNA end position 
aaaaaacctt
Secondary structure (Cloverleaf model)
>SRA1001564	Asn	GTT
                   T      GTtc aaaaaacctt
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     T - A
                     G - C          C G
                    T     C C A C C     A
      T A A        G      | | | | |     G
    C       C G C G       G G T G G     C
    G       | | | |                 T T
    G       G C G C
      C C A        G     AGGAT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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