The detailed information of tRNA gene sequence


Sequence ID>SRA1001597
Genome IDSRR001073.12657
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 18
End posion on genome 94
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccaccattt
tRNA gene sequence 
GCCTAGATAGCTCAGTTGGCTAGAGCACCCGGTTCATACCCGGGCGGTCGAAGGTTCGAA
TCCTTTTCTAGGCACCA
Downstream region at tRNA end position 
tttgaaactt
Secondary structure (Cloverleaf model)
>SRA1001597	Met	CAT
                   t      ACCA tttgaaactt
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C
                     A - T          T A
                    T     T T T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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