The detailed information of tRNA gene sequence


Sequence ID>SRA1001601
Genome IDSRR001073.21352
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 107
End posion on genome 33
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taattttgaA
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGATTGCAAATCCTTTTATTCCCCAGTTCGAAT
CCGGGTGCCGCCTAtt
Downstream region at tRNA end position 
taaaaagaag
Secondary structure (Cloverleaf model)
>SRA1001601	Cys	GCA
                   A      TAtt taaaaagaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | |   |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TTATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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