The detailed information of tRNA gene sequence


Sequence ID>SRA1001602
Genome IDSRR001073.25631
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 92
End posion on genome 4
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ntcaaaacac
tRNA gene sequence 
AGAGAGCTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGGTTCGAATCCCTCGCTCTCTACCA
Downstream region at tRNA end position 
agannnnnnn
Secondary structure (Cloverleaf model)
>SRA1001602	Ser	TGA
                   c      ACCA agannnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCCG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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