The detailed information of tRNA gene sequence


Sequence ID>SRA1001605
Genome IDSRR001073.30525
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 37
End posion on genome 110
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gttgtgttcc
tRNA gene sequence 
TCCCGCGTAGTCTAGTTGGTTAGGATATGCGGCTCTCACCCGCAAGACCCGGGTTCAAAT
CCCGGCGTGGGAACtt
Downstream region at tRNA end position 
ttttnttttt
Secondary structure (Cloverleaf model)
>SRA1001605	Glu	CTC
                   c      ACtt ttttnttttt
                     T - A
                     C - G
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    T       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     AGAC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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