The detailed information of tRNA gene sequence


Sequence ID>SRA1001608
Genome IDSRR001073.46519
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 93
End posion on genome 17
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaatctataa
tRNA gene sequence 
GGAAGCATAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGGTCACTGGTTCAAG
TCCAGTTGTTTCCACCA
Downstream region at tRNA end position 
tatggggtgt
Secondary structure (Cloverleaf model)
>SRA1001608	Val	TAC
                   a      ACCA tatggggtgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     A - T          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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