The detailed information of tRNA gene sequence


Sequence ID>SRA1001609
Genome IDSRR001073.47561
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 22
End posion on genome 104
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgtctgctaa
tRNA gene sequence 
GCCCGGATGGCGGAATTGGTAGACGCGCTGGTCTCAAACACCTGTGGGAAACCGTGCCGG
TTCGACTCCGGCTCCGGGTACAA
Downstream region at tRNA end position 
aaaacctctt
Secondary structure (Cloverleaf model)
>SRA1001609	Leu	CAA
                   a      ACAA aaaacctctt
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGAAACCGT
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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