The detailed information of tRNA gene sequence


Sequence ID>SRA1001613
Genome IDSRR001073.55216
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)
Species
Start position on genome 9
End posion on genome 85
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nntataatac
tRNA gene sequence 
GGATCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCGGGGTTCGAG
TCCCTGAAGGTCCACCA
Downstream region at tRNA end position 
tatgggggtt
Secondary structure (Cloverleaf model)
>SRA1001613	Met	CAT
                   c      ACCA tatgggggtt
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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