The detailed information of tRNA gene sequence


Sequence ID>SRA1001617
Genome IDSRR001074.29331
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000162)
Species
Start position on genome 23
End posion on genome 106
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tttaatcttT
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCACGTTTCAGGTGCGTGTGTCGCAAGGCGTGCA
GGTTCGAGTCCTGTTCTGGGCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001617	Leu	CAG
                   T      ACnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCGCAAGGCGT
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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