The detailed information of tRNA gene sequence


Sequence ID>SRA1001627
Genome IDSRR001075.9899
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 85
End posion on genome 11
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
accagtacat
tRNA gene sequence 
GGAGTGGTAGCTTAAAGGTAGAGCAGTAGACTGTTAATCTATTAGATGTGAGTTCGATTC
TCACCCACTACGCAA
Downstream region at tRNA end position 
atggtccatt
Secondary structure (Cloverleaf model)
>SRA1001627	Asn	GTT
                   t      GCAA atggtccatt
                     G - C
                     G   A
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T T
                    T     C A C T C     A
        A A        A      | | | | |     G
      A     T T C G       G T G A G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     TAGAT
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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