The detailed information of tRNA gene sequence


Sequence ID>SRA1001633
Genome IDSRR001075.35788
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 90
End posion on genome 15
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caattttcaa
tRNA gene sequence 
GCATCGGTAGCTCAGTTGGTAGAGCGCCCGGCTTCCAACCGGACGGTCGTGGGTTCAAGT
CCCACTCGATGCTCCA
Downstream region at tRNA end position 
ctctccccaa
Secondary structure (Cloverleaf model)
>SRA1001633	Gly	TCC
                   a      TCCA ctctccccaa
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     G - C
                     G + T          T G
                    T     C A C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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