The detailed information of tRNA gene sequence


Sequence ID>SRA1001635
Genome IDSRR001075.52111
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 2
End posion on genome 75
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGACAGGTGGCGCAGTGGTGACGCTTTGGAGTCGCTCTCTGAATTGACGATGGTTCGAAT
CCATCTCTGTCCACgc
Downstream region at tRNA end position 
cttaataccg
Secondary structure (Cloverleaf model)
>SRA1001635	Ala	CGC
                   t      ACgc cttaataccg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C T A C C     A
        G A        G      | | | | |     G
      T     C G C G       G A T G G     C
      G       | | |                 T T
      G     A C G C
        T G        T     ATTGAC
                    T - A
                    T + G
                    G + T
                    G - C
                    A - T
                  G       C
                  T       T
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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