The detailed information of tRNA gene sequence


Sequence ID>SRA1001637
Genome IDSRR001075.59407
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000163)
Species
Start position on genome 89
End posion on genome 4
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
acgacaagat
tRNA gene sequence 
GGAAGGGTATGCAAGAGGCTAAAGCACGGGGATTGTAAATCCTCTCTGGAAACGGTTCAA
AGGTTCGAATCCTTTCCCTTCCACCA
Downstream region at tRNA end position 
tctnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001637	Tyr	GTA
                   t      ACCA tctnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T T T C C     A
      A G A        A      | | | | |     G
    G       A C G T       A A A G G     C
    G         | | |                 T T
    C       A G C A
      T A A        C     TCTGGAAACGGTTC
                    G - C
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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