The detailed information of tRNA gene sequence


Sequence ID>SRA1001638
Genome IDSRR001076.4180
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 20
End posion on genome 95
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgttttattT
tRNA gene sequence 
CGGGTATTGGCTCATTTCGGTAGAGCGCTACATTTGGGATGTAGAAGTCGCAAGTTCAAA
TCCTGCATATCCGATtg
Downstream region at tRNA end position 
gggttaagga
Secondary structure (Cloverleaf model)
>SRA1001638	Pro	TGG
                   T      ATtg gggttaagga
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T
                     T - A          T A
                    T     C G T C C     A
      T T A        G      | | |   |     A
    T       C T C G       G C A A G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK