The detailed information of tRNA gene sequence


Sequence ID>SRA1001643
Genome IDSRR001076.30435
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 3
End posion on genome 79
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GTCCCGTTAGCTCAGTTGGATAGAGCAACAACCTTCTAAGTTGTGGGTCAGACGTTCGAA
TCGTCTACGGGATACCA
Downstream region at tRNA end position 
tcaattaact
Secondary structure (Cloverleaf model)
>SRA1001643	Arg	TCT
                   t      ACCA tcaattaact
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C T G C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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