The detailed information of tRNA gene sequence


Sequence ID>SRA1001644
Genome IDSRR001076.36736
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 39
End posion on genome 112
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
accaagtttt
tRNA gene sequence 
GCTCTTATAGTAAAGTGGTATTACGCGGCTTTGGTATAGCCGAATCCTAAGTTCAATTCT
TAGTGAGAGCACCA
Downstream region at tRNA end position 
gttgnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001644	Thr	GGT
                   t      ACCA gttgnnnnnn
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T + G
                     A - T          T T
                    T     G A T T C     A
        G A        A      | | | | |     A
      T     A A T G       C T A A G     C
      G     | | | |                 T T
      G     T T A C
        T A        G     AATC
                    C - G
                    G - C
                    G - C
                    C - G
                    T - A
                  T       T
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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