The detailed information of tRNA gene sequence


Sequence ID>SRA1001650
Genome IDSRR001076.45115
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 40
End posion on genome 113
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcaattacga
tRNA gene sequence 
ACATTCTTAGTTTAATGGTAGAACTACGGTCTCCAAAACCGTGAGTATTGGTTCGACTCC
AGTAGAATGTGCAA
Downstream region at tRNA end position 
acgnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001650	Trp	CCA
                   a      GCAA acgnnnnnnn
                     A - T
                     C - G
                     A - T
                     T - A
                     T - A
                     C - G
                     T - A          T C
                    T     T G A C C     A
        A A        A      | + | | |     G
      T     T T T G       A T T G G     C
      G     + | | |                 T T
      G     G A A C
        T A        T     GAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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