The detailed information of tRNA gene sequence


Sequence ID>SRA1001651
Genome IDSRR001076.50987
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttttttgtaa
tRNA gene sequence
GGACTTGTAGCTCAGTAGGTTAGAGCGCCGGTCTCATAAACCGTAGGTCCCTGGTTCGAG
CCCAGGCTGGTCCACAA
Downstream region at tRNA end position
ttattnnnnn
Secondary structure (Cloverleaf model)
>SRA1001651	Met	CAT
                   a      ACAA ttattnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T   T
                     G - C          C G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    A       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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