The detailed information of tRNA gene sequence


Sequence ID>SRA1001652
Genome IDSRR001076.51340
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 8
End posion on genome 81
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
nnntactctt
tRNA gene sequence 
GCGGATATAGTGTAGCGGTAACACTCAACTCTTCCAAAGTTGCATCGCCAGTTCAAATCT
GGTTATCCGTTCCA
Downstream region at tRNA end position 
tggggtattg
Secondary structure (Cloverleaf model)
>SRA1001652	Gly	TCC
                   t      TCCA tggggtattg
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     T G G T C     A
        G A        A      + | | | |     A
      C     T G T G       G C C A G     C
      G     | | | |                 T T
      G     A C A C
        T A        T     CATC
                    C - G
                    A - T
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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