The detailed information of tRNA gene sequence


Sequence ID>SRA1001657
Genome IDSRR001076.56268
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 94
End posion on genome 19
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nntgtcgacg
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGTCGCGAGTTCGAGC
CTCGTTTCCCGCTCCA
Downstream region at tRNA end position 
ttaaaattta
Secondary structure (Cloverleaf model)
>SRA1001657	Gly	GCC
                   g      TCCA ttaaaattta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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