The detailed information of tRNA gene sequence


Sequence ID>SRA1001658
Genome IDSRR001076.57094
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 11
End posion on genome 88
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccaaaataat
tRNA gene sequence 
GCCTCCGTAGCTCAGACAGGCCAGAGCAACNCCCTTGTAAGGAGAAGGTCGCAGGTTCGA
TTCCTGTCGGAGGCTCTA
Downstream region at tRNA end position 
aatcaatgta
Secondary structure (Cloverleaf model)
>SRA1001658	Thr	TGT
                   t      TCTA aatcaatgta
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
    C A G A        A      + | | | |     G
  A         C T C G       G C A G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          A     AGGTC
                    A   A
                    C - G
                    N   A
                    C - G
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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