The detailed information of tRNA gene sequence


Sequence ID>SRA1001659
Genome IDSRR001076.68319
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggcgtaccat
tRNA gene sequence 
GTCCCGTTAGCTCAGTTGGATAGAGCAACAACCTTCTAAGTTGTGGGTCAGACGTTCGAA
TCGTCTACGGAGTACCA
Downstream region at tRNA end position 
ctnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001659	Arg	TCT
                   t      ACCA ctnnnnnnnn
                     G + T
                     T + G
                     C   A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C T G C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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