The detailed information of tRNA gene sequence


Sequence ID>SRA1001660
Genome IDSRR001077.6400
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; Hawai'i Marine Laboratory Refuge Point Reef Corals (SRP000165)
Species
Start position on genome 9
End posion on genome 95
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nngcacatgt
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGTCCTAGTGGTGGTAACACTGTG
GAGGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
gcagttttct
Secondary structure (Cloverleaf model)
>SRA1001660	Leu	CAG
                   t      ACCA gcagttttct
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTGGTAACACTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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