The detailed information of tRNA gene sequence


Sequence ID>SRA1001661
Genome IDSRR001077.8952
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; Hawai'i Marine Laboratory Refuge Point Reef Corals (SRP000165)
Species
Start position on genome 123
End posion on genome 48
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnctatt
tRNA gene sequence 
GGGCAGTTCATCTAGTGGTTTAGGATCCCGGATTGTCTATCCGGTCACGGGGGTTCGACT
CCCCCACCGCCCGCCA
Downstream region at tRNA end position 
atcatacttt
Secondary structure (Cloverleaf model)
>SRA1001661	Asp	GTC
                   t      GCCA atcatacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     A   C
                     G - C
                     T - A          T C
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T C T A       G G G G G     C
    G       + | | |                 T T
    T       G G A T
      T T A        C     TCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK