The detailed information of tRNA gene sequence


Sequence ID>SRA1001662
Genome IDSRR001077.13466
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; Hawai'i Marine Laboratory Refuge Point Reef Corals (SRP000165)
Species
Start position on genome 8
End posion on genome 81
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnatatggg
tRNA gene sequence 
CGGAGCGTAGCATCAGTGGTAAATGCACTCGGCTGATATCCGAGAGATAGCTGGTTCGAC
TCCAGCCGTTCCGAttg
Downstream region at tRNA end position 
acacgtaagg
Secondary structure (Cloverleaf model)
>SRA1001662	Ile	GAT
                   g      Attg acacgtaagg
                     C - G
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C          T C
                    T     C G A C C     A
      G A C        A      | | | | |     G
    T       T A C G       G C T G G     C
    G       | | | |                 T T
    G       A T G C
      T A A        A     AGATA
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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