The detailed information of tRNA gene sequence


Sequence ID>SRA1001665
Genome IDSRR001077.26701
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; Hawai'i Marine Laboratory Refuge Point Reef Corals (SRP000165)
Species
Start position on genome 33
End posion on genome 106
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actaccacta
tRNA gene sequence 
CGGGGTGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGAAGGTTCAAA
TCCTTTCACCCCGAttt
Downstream region at tRNA end position 
ttcttatnnn
Secondary structure (Cloverleaf model)
>SRA1001665	Pro	TGG
                   a      Attt ttcttatnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      T G A        A      + | | | |     A
    T       C T C G       G A A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     TGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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