The detailed information of tRNA gene sequence


Sequence ID>SRA1001667
Genome IDSRR001078.834
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
Species
Start position on genome 29
End posion on genome 105
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agaataaagc
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
attattctaa
Secondary structure (Cloverleaf model)
>SRA1001667	Asp	GTC
                   c      GCCA attattctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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