The detailed information of tRNA gene sequence


Sequence ID>SRA1001668
Genome IDSRR001078.11982
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
Species
Start position on genome 49
End posion on genome 125
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aaccacaaaA
tRNA gene sequence 
GCGGAAGTAGCTCTATTTGGTAGAGGCACGACCTTGCCAAGGTCGGGGTGGCCGGTTCGA
GCCCGGTCTTCCNCTGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001668	Gly	GCC
                   A      TGnn nnnnnnnnnn
                     G - C
                     C   N
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          C G
                    T     T G G C C     A
    T T A T        A      + | | | |     G
  T         C T C G       G C C G G     C
  G           + | |                 T T
  G         A G G C
    T A G          A     GGGTG
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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