The detailed information of tRNA gene sequence


Sequence ID>SRA1001678
Genome IDSRR001080.22383
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ntaacttaaa
tRNA gene sequence 
CGGTATGTAGTTCAACTGGTTAGAGCACCACGCTGATAACGTGGAAGTTGGAGGTTCAAG
TCCTTCCATACCGACTA
Downstream region at tRNA end position 
atataattaa
Secondary structure (Cloverleaf model)
>SRA1001678	Ile	GAT
                   a      ACTA atataattaa
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C T T C C     A
      C A A        A      | + | | |     A
    T       C T T G       G G A G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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