The detailed information of tRNA gene sequence


Sequence ID>SRA1001679
Genome IDSRR001080.23330
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
Species
Start position on genome 25
End posion on genome 107
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ggtatttatt
tRNA gene sequence 
GCCTCAGTGGTGGAATGGTAGACACAAGGGATTTAAAATCCCTCGCTTAGTGCGTGAGAG
TTCGAATCTCTCTTGAGGCACCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001679	Leu	TAA
                   t      ACCA annnnnnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G + T          T A
                    T     C T C T C     A
      T A A        G      | | | | |     G
    G       G G T G       G A G A G     C
    G         | | |                 T T
    T       A C A C
      A G          A     CGCTTAGTGCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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