The detailed information of tRNA gene sequence


Sequence ID>SRA1001682
Genome IDSRR001081.8190
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a reduced pH stressor experiment (SRP000169)
Species
Start position on genome 46
End posion on genome 118
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
taggtcggaT
tRNA gene sequence 
TGCCCGATAGTATAAGGGTAGTACAACTGATTTTGGTTCAGTATGTCTTGGTTCGAATCC
AGGTCGGGCAANnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001682	Gln	TTG
                   T      ANnn nnnnnnnnnn
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G G A C C     A
        A A        A      | + | | |     G
      G     T A T G       C T T G G     C
      G     + | | |                 T T
      G     G T A C
        T A        A     ATGT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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