The detailed information of tRNA gene sequence


Sequence ID>SRA1001683
Genome IDSRR001081.17776
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a reduced pH stressor experiment (SRP000169)
Species
Start position on genome 91
End posion on genome 17
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
caaattcgcc
tRNA gene sequence 
GGCCTCGTAGTACAATGGATAGTATAAGAGTTTCCGAAGCTCCAGATACAGGTTCGATTC
CTGTCGAGGCTACAA
Downstream region at tRNA end position 
aaaaagactg
Secondary structure (Cloverleaf model)
>SRA1001683	Arg	CCG
                   c      ACAA aaaaagactg
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C A T G       A C A G G     C
    G       | | | +                 T T
    A       G T A T
      T A          A     AGAT
                    A   C
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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